1 mbobra 1.1 /*
2 * MODULE NAME: update_sharp_keys.c
3 *
4 * DESCRIPTION: This module recalculates SHARP keywords. This is accomplished by
5 * cloning a record, recalculating keywords of choice (i.e., user input),
6 * and pointing to the same segments as the old record. Associated error keys
7 * are computed by default.
8 *
9 * This module accounts for versioning by appending to the keyword CODEVER7 and HISTORY:
10 * CODEVER7 will contain multiple lines: the production build of sharp.c, the
11 * production build of include file sw_functions.c, and the production build
12 * of update_sharp_keys.c. HISTORY will include a human-readable sentence about which
13 * keywords were updated.
14 *
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15 mbobra 1.10 * N.B.: This module calculates the keyword specified in keylist and then does a
16 * drms_copykeys() to copy over all the remaining keywords. However, if [1] a keyword
17 * does not exist in the .jsd files of the input series, and [2] said keyword X is not
18 * specified in keylist, then [3] drms_copykeys() will copy DRMS_MISSING_VALUE into
19 * keyword X for all the output series.
20 *
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21 mbobra 1.1 * This module does not produce segments.
22 *
23 * INPUTS : -- DRMS SHARP series
24 * -- DRMS SHARP CEA series
25 * -- HARPNUM
26 * -- comma separated list of keywords to recalculate
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27 mbobra 1.9 * -- DEBUG flag (use like this debug=debug)
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28 mbobra 1.1 *
29 * AUTHOR : Monica Bobra
30 *
31 * Version : v0.0 Jun 14 2013
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32 mbobra 1.6 * v0.1 Feb 11 2014 Added different input and output series
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33 mbobra 1.1 *
34 * EXAMPLE :
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35 mbobra 1.6 * update_sharp_keys sharpseriesin=hmi.sharp_720s sharpceaseriesin=hmi.sharp_cea_720s //
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36 mbobra 1.9 * HARPNUM=1 sharpseriesout=hmi.sharp_720s sharpceaseriesout=hmi.sharp_cea_720s keylist=USFLUX,TOTPOT debug=debug
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37 mbobra 1.1 *
38 */
39
40 /* Include files */
41 #include <stdio.h>
42 #include <stdlib.h>
43 #include <time.h>
44 #include <sys/time.h>
45 #include <math.h>
46 #include <string.h>
47 #include "jsoc_main.h"
48 #include "astro.h"
49 #include "fstats.h"
50 #include "cartography.c"
51 #include "fresize.h"
52 #include "finterpolate.h"
53 #include "img2helioVector.c"
54 #include "copy_me_keys.c"
55 #include "errorprop.c"
56 #include "sw_functions.c"
57 #include <mkl_blas.h>
58 mbobra 1.1 #include <mkl_service.h>
59 #include <mkl_lapack.h>
60 #include <mkl_vml_functions.h>
61 #include <omp.h>
62
63 /* Define values */
64 #define PI (M_PI)
65 #define RADSINDEG (PI/180.)
66 #define ARRLENGTH(ARR) (sizeof(ARR) / sizeof(ARR[0]))
67 #define DIE(msg) {fflush(stdout); fprintf(stderr,"%s, status=%d\n", msg, status); return(status);}
68 #define SHOW(msg) {printf("%s", msg); fflush(stdout);}
69
70 char *module_name = "update_sharp_keys"; /* Module name */
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71 mbobra 1.6 char *version_id = "2014 Feb 12"; /* Version number */
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72 mbobra 1.1
73 ModuleArgs_t module_args[] =
74 {
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75 mbobra 1.9 {ARG_STRING, "sharpseriesin", NULL, "Input Sharp dataseries"},
76 {ARG_STRING, "sharpceaseriesin", NULL, "Input Sharp CEA dataseries"},
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77 mbobra 1.6 {ARG_STRING, "sharpseriesout", NULL, "Output Sharp dataseries"},
78 {ARG_STRING, "sharpceaseriesout", NULL, "Output Sharp CEA dataseries"},
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79 mbobra 1.9 {ARG_INT, "HARPNUM", NULL, "HARP number"},
80 {ARG_STRING, "keylist", NULL, "comma separated list of keywords to update"},
81 {ARG_STRING, "debug", NULL, "debug mode functionality. use like this: debug=debug"},
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82 mbobra 1.1 {ARG_END}
83 };
84
85
86 int DoIt(void)
87 {
88 int errbufstat=setvbuf(stderr, NULL, _IONBF, BUFSIZ);
89 int outbufstat=setvbuf(stdout, NULL, _IONBF, BUFSIZ);
90
91 int status = DRMS_SUCCESS;
92 int nrecs, irec;
93
94 /* Keywords */
95 float mean_vf;
96 float absFlux;
97 float count_mask;
98 float mean_hf;
99 float mean_gamma;
100 float mean_derivative_btotal;
101 float mean_derivative_bh;
102 float mean_derivative_bz;
103 mbobra 1.1 float mean_jz;
104 float us_i;
105 float mean_alpha;
106 float mean_ih;
107 float total_us_ih;
108 float total_abs_ih;
109 float totaljz;
110 float totpot;
111 float meanpot;
112 float area_w_shear_gt_45;
113 float meanshear_angle;
114 float area_w_shear_gt_45h;
115 float meanshear_angleh;
116 float mean_derivative_btotal_err;
117 float mean_vf_err;
118 float mean_gamma_err;
119 float mean_derivative_bh_err;
120 float mean_derivative_bz_err;
121 float mean_jz_err;
122 float us_i_err;
123 float mean_alpha_err;
124 mbobra 1.1 float mean_ih_err;
125 float total_us_ih_err;
126 float total_abs_ih_err;
127 float totaljz_err;
128 float meanpot_err;
129 float totpot_err;
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130 mbobra 1.6 float Rparam;
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131 mbobra 1.1 float meanshear_angle_err;
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132 mbobra 1.8 float totfx;
133 float totfy;
134 float totfz;
135 float totbsq;
136 float epsx;
137 float epsy;
138 float epsz;
139
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140 mbobra 1.6 char *sharpseriesin = (char *) params_get_str(&cmdparams, "sharpseriesin");
141 char *sharpceaseriesin = (char *) params_get_str(&cmdparams, "sharpceaseriesin");
142 char *sharpseriesout = (char *) params_get_str(&cmdparams, "sharpseriesout");
143 char *sharpceaseriesout = (char *) params_get_str(&cmdparams, "sharpceaseriesout");
144
145 int sameflag = strcmp(sharpseriesin, sharpseriesout) == 0;
146 int testflag = strcmp(sharpceaseriesin, sharpceaseriesout) == 0;
147 if (testflag != sameflag)
148 DIE("Either both outputs must be the same as their inputs, or both be different.");
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149 mbobra 1.1
150 int harpnum = params_get_int(&cmdparams, "HARPNUM");
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151 mbobra 1.6
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152 mbobra 1.1 char sharpquery[256];
153 char sharpceaquery[256];
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154 mbobra 1.6 sprintf(sharpceaquery, "%s[%d]\n", sharpceaseriesin,harpnum);
155 printf(sharpceaquery, "%s[%d]\n", sharpceaseriesin,harpnum);
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156 mbobra 1.1
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157 mbobra 1.6 sprintf(sharpquery, "%s[%d]\n", sharpseriesin,harpnum);
158 sprintf(sharpquery, "%s[%d]\n", sharpseriesin,harpnum);
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159 mbobra 1.1
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160 mbobra 1.6 DRMS_RecordSet_t *sharpinrecset= drms_open_records(drms_env, sharpquery, &status);
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161 mbobra 1.1 if (status != DRMS_SUCCESS)
162 DIE("Problem opening sharp recordset.");
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163 mbobra 1.6 nrecs=sharpinrecset->n;
164 if (nrecs == 0)
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165 mbobra 1.1 DIE("Sharp recordset contains no records.");
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166 mbobra 1.6 printf("nrecs=%d\n",nrecs);
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167 mbobra 1.1
168 DRMS_RecordSet_t *sharpceainrecset = drms_open_records(drms_env, sharpceaquery, &status);
169 if (status != DRMS_SUCCESS)
170 DIE("Problem opening sharp cea recordset.");
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171 mbobra 1.6 if (sharpceainrecset->n != nrecs)
172 DIE("Sharp cea recordset differs from sharp recordset.");
173
174 DRMS_RecordSet_t *sharpoutrecset, *sharpceaoutrecset;
175 if (sameflag)
176 {
177 sharpoutrecset = drms_clone_records(sharpinrecset, DRMS_PERMANENT, DRMS_SHARE_SEGMENTS, &status);
178 if (status != DRMS_SUCCESS)
179 DIE("Problem cloning sharp records.");
180 sharpceaoutrecset = drms_clone_records(sharpceainrecset, DRMS_PERMANENT, DRMS_SHARE_SEGMENTS, &status);
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181 mbobra 1.1 if (status != DRMS_SUCCESS)
182 DIE("Problem cloning sharp cea records.");
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183 mbobra 1.6 }
184 else
185 {
186 sharpoutrecset = drms_create_records(drms_env, nrecs, sharpseriesout, DRMS_PERMANENT, &status);
187 if (status != DRMS_SUCCESS)
188 DIE("Problem creating sharp records.");
189 sharpceaoutrecset = drms_create_records(drms_env, nrecs, sharpceaseriesout, DRMS_PERMANENT, &status);
190 if (status != DRMS_SUCCESS)
191 DIE("Problem creating sharp cea records.");
192 }
193
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194 mbobra 1.1
195 char *keylist = (char *) params_get_str(&cmdparams, "keylist");
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196 mbobra 1.9 char *debug = (char *) params_get_str(&cmdparams, "debug");
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197 mbobra 1.1
198 // Flags to indicate which keyword will be recalculated
199 int meanvfflag = (strstr(keylist,"USFLUX") != NULL); // generalize so that lowercase is acceptable
200 int totpotflag = (strstr(keylist,"TOTPOT") != NULL);
201 int meangamflag = (strstr(keylist,"MEANGAM") != NULL);
202 int meangbtflag = (strstr(keylist,"MEANGBT") != NULL);
203 int meangbzflag = (strstr(keylist,"MEANGBZ") != NULL);
204 int meangbhflag = (strstr(keylist,"MEANGBH") != NULL);
205 int meanjzdflag = (strstr(keylist,"MEANJZD") != NULL);
206 int totusjzflag = (strstr(keylist,"TOTUSJZ") != NULL);
207 int meanalpflag = (strstr(keylist,"MEANALP") != NULL);
208 int meanjzhflag = (strstr(keylist,"MEANJZH") != NULL);
209 int totusjhflag = (strstr(keylist,"TOTUSJH") != NULL);
210 int absnjzhflag = (strstr(keylist,"ABSNJZH") != NULL);
211 int savncppflag = (strstr(keylist,"SAVNCPP") != NULL);
212 int meanpotflag = (strstr(keylist,"MEANPOT") != NULL);
213 int meanshrflag = (strstr(keylist,"MEANSHR") != NULL);
214 int shrgt45flag = (strstr(keylist,"SHRGT45") != NULL);
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215 mbobra 1.6 int r_valueflag = (strstr(keylist,"R_VALUE") != NULL);
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216 mbobra 1.8 int totbsqflag = (strstr(keylist,"TOTBSQ") != NULL);
217 int totfxflag = (strstr(keylist,"TOTFX") != NULL);
218 int totfyflag = (strstr(keylist,"TOTFY") != NULL);
219 int totfzflag = (strstr(keylist,"TOTFZ") != NULL);
220 int epsxflag = (strstr(keylist,"EPSX") != NULL);
221 int epsyflag = (strstr(keylist,"EPSY") != NULL);
222 int epszflag = (strstr(keylist,"EPSZ") != NULL);
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223 mbobra 1.9 int debugflag = (strstr(debug,"debug") != NULL);
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224 mbobra 1.8
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225 mbobra 1.11
226 for (irec=0;irec<nrecs;irec++)
227 {
228
229
230 DRMS_Record_t *sharpinrec = sharpinrecset->records[irec];
231 DRMS_Record_t *sharpceainrec = sharpceainrecset->records[irec];
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232 mbobra 1.1 DRMS_Segment_t *inseg = drms_segment_lookup(sharpceainrec, "Br");
233 int nx = inseg->axis[0];
234 int ny = inseg->axis[1];
235 int nxny = nx * ny;
236 int dims[2] = {nx, ny};
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237 mbobra 1.6
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238 mbobra 1.1 // Temp arrays
239 float *bh = (float *) (malloc(nxny * sizeof(float)));
240 float *bt = (float *) (malloc(nxny * sizeof(float)));
241 float *jz = (float *) (malloc(nxny * sizeof(float)));
242 float *bpx = (float *) (malloc(nxny * sizeof(float)));
243 float *bpy = (float *) (malloc(nxny * sizeof(float)));
244 float *bpz = (float *) (malloc(nxny * sizeof(float)));
245 float *derx = (float *) (malloc(nxny * sizeof(float)));
246 float *dery = (float *) (malloc(nxny * sizeof(float)));
247 float *derx_bt = (float *) (malloc(nxny * sizeof(float)));
248 float *dery_bt = (float *) (malloc(nxny * sizeof(float)));
249 float *derx_bh = (float *) (malloc(nxny * sizeof(float)));
250 float *dery_bh = (float *) (malloc(nxny * sizeof(float)));
251 float *derx_bz = (float *) (malloc(nxny * sizeof(float)));
252 float *dery_bz = (float *) (malloc(nxny * sizeof(float)));
253 float *bt_err = (float *) (malloc(nxny * sizeof(float)));
254 float *bh_err = (float *) (malloc(nxny * sizeof(float)));
255 float *jz_err = (float *) (malloc(nxny * sizeof(float)));
256 float *jz_err_squared = (float *) (malloc(nxny * sizeof(float)));
257 float *jz_rms_err = (float *) (malloc(nxny * sizeof(float)));
258 float *jz_err_squared_smooth = (float *) (malloc(nxny * sizeof(float)));
259 mbobra 1.1 float *jz_smooth = (float *) (malloc(nxny * sizeof(float)));
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260 mbobra 1.11 float *err_term1 = (float *) (malloc(nxny * sizeof(float)));
261 float *err_term2 = (float *) (malloc(nxny * sizeof(float)));
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262 mbobra 1.1
263 // ephemeris variables
264 float cdelt1_orig, cdelt1, dsun_obs, imcrpix1, imcrpix2, crpix1, crpix2;
265 double rsun_ref, rsun_obs;
266
267 // outrecords
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268 mbobra 1.6 DRMS_Record_t *sharpoutrec, *sharpceaoutrec, *testrec;
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269 mbobra 1.1
270 // prepare to set CODEVER7 (CVS Version of the SHARP module)
271 char *cvsinfo0;
272 char *history0;
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273 mbobra 1.11 char *cvsinfo1 = strdup("$Id: update_sharp_keys.c,v 1.10 2014/06/09 21:07:41 mbobra Exp $");
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274 mbobra 1.1 char *cvsinfo2 = sw_functions_version();
275 char *cvsinfoall = (char *)malloc(2048);
276 char historyofthemodule[2048];
277 cvsinfo0 = drms_getkey_string(sharpinrec, "CODEVER7", &status);
278 strcpy(cvsinfoall,cvsinfo0);
279 strcat(cvsinfoall,"\n");
280 strcat(cvsinfoall,cvsinfo2);
281
282 // prepare to set HISTORY (History of the data)
283 char timebuf[1024];
284 float UNIX_epoch = -220924792.000;
285 sprint_time(timebuf, (double)time(NULL) + UNIX_epoch, "ISO", 0);
286 sprintf(historyofthemodule,"The following keywords were re-computed on %s: %s.",timebuf,keylist);
287 printf("historyofthemodule=%s\n",historyofthemodule);
288 history0 = drms_getkey_string(sharpinrec, "HISTORY", &status);
289 strcat(historyofthemodule,"\n");
290 strcat(historyofthemodule,history0);
291
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292 mbobra 1.6 // grab one record such that we can malloc the R-parameter calculation arrays outside of the loop
293 // assume scale = round(2./cdelt1) does not change for any given HARP
294 testrec = sharpceainrecset->records[nrecs/2];
295 dsun_obs = drms_getkey_float(testrec, "DSUN_OBS", &status);
296 rsun_ref = drms_getkey_double(testrec, "RSUN_REF", &status);
297 cdelt1_orig = drms_getkey_float(testrec, "CDELT1", &status);
298 cdelt1 = (atan((rsun_ref*cdelt1_orig*RADSINDEG)/(dsun_obs)))*(1/RADSINDEG)*(3600.);
299 int scale = round(2.0/cdelt1);
300 int nx1 = nx/scale;
301 int ny1 = ny/scale;
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302 mbobra 1.7 int nxp = nx1+40;
303 int nyp = ny1+40;
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304 mbobra 1.6
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305 mbobra 1.10 // check to make sure that the dimensions passed into fsample() are adequate
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306 mbobra 1.6 if (nx1 > floor((nx-1)/scale + 1) )
307 DIE("X-dimension of output array in fsample() is too large.");
308 if (ny1 > floor((ny-1)/scale + 1) )
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309 mbobra 1.10 DIE("Y-dimension of output array in fsample() is too large.");
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310 mbobra 1.6
311 // malloc some arrays for the R parameter calculation
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312 mbobra 1.7 float *rim = (float *)malloc(nx1*ny1*sizeof(float));
313 float *p1p0 = (float *)malloc(nx1*ny1*sizeof(float));
314 float *p1n0 = (float *)malloc(nx1*ny1*sizeof(float));
315 float *p1p = (float *)malloc(nx1*ny1*sizeof(float));
316 float *p1n = (float *)malloc(nx1*ny1*sizeof(float));
317 float *p1 = (float *)malloc(nx1*ny1*sizeof(float));
318 float *pmap = (float *)malloc(nxp*nyp*sizeof(float));
319 float *p1pad = (float *)malloc(nxp*nyp*sizeof(float));
320 float *pmapn = (float *)malloc(nx1*ny1*sizeof(float));
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321 mbobra 1.8
322 // define some arrays for the lorentz force calculation
323 float *fx = (float *) (malloc(nxny * sizeof(float)));
324 float *fy = (float *) (malloc(nxny * sizeof(float)));
325 float *fz = (float *) (malloc(nxny * sizeof(float)));
326
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327 mbobra 1.1 // Get emphemeris
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328 mbobra 1.7 sharpinrec = sharpinrecset->records[irec];
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329 mbobra 1.6 sharpceainrec = sharpceainrecset->records[irec];
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330 mbobra 1.7 cdelt1_orig = drms_getkey_float(sharpceainrec, "CDELT1", &status);
331 dsun_obs = drms_getkey_float(sharpinrec, "DSUN_OBS", &status);
332 rsun_ref = drms_getkey_double(sharpinrec, "RSUN_REF", &status);
333 rsun_obs = drms_getkey_double(sharpinrec, "RSUN_OBS", &status);
334 imcrpix1 = drms_getkey_float(sharpinrec, "IMCRPIX1", &status);
335 imcrpix2 = drms_getkey_float(sharpinrec, "IMCRPIX2", &status);
336 crpix1 = drms_getkey_float(sharpinrec, "CRPIX1", &status);
337 crpix2 = drms_getkey_float(sharpinrec, "CRPIX2", &status);
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338 mbobra 1.6
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339 mbobra 1.1 sharpoutrec = sharpoutrecset->records[irec];
340 sharpceaoutrec = sharpceaoutrecset->records[irec];
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341 mbobra 1.6 if (!sameflag)
342 {
343 drms_copykeys(sharpoutrec, sharpinrec, 0, kDRMS_KeyClass_Explicit);
344 drms_copykeys(sharpceaoutrec, sharpceainrec, 0, kDRMS_KeyClass_Explicit);
345 }
346
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347 mbobra 1.11 TIME trec, tnow; /* 1970.01.01_00:00:00_UTC */
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348 mbobra 1.6 tnow = (double)time(NULL);
349 tnow += UNIX_epoch;
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350 mbobra 1.1
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351 mbobra 1.9 if (debugflag)
352 {
353 printf("i=%d\n",irec);
354 }
355
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356 mbobra 1.6 // set CODEVER7 and HISTORY and DATE
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357 mbobra 1.1 drms_setkey_string(sharpoutrec, "CODEVER7", cvsinfoall);
358 drms_setkey_string(sharpoutrec,"HISTORY",historyofthemodule);
359 drms_setkey_string(sharpceaoutrec, "CODEVER7", cvsinfoall);
360 drms_setkey_string(sharpceaoutrec,"HISTORY",historyofthemodule);
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361 mbobra 1.6 drms_setkey_time(sharpoutrec,"DATE",tnow);
362 drms_setkey_time(sharpceaoutrec,"DATE",tnow);
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363 mbobra 1.1
364 // Get bx, by, bz, mask
365 // Use HARP (Turmon) bitmap as a threshold on spaceweather quantities
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366 mbobra 1.6 DRMS_Segment_t *bitmaskSeg = drms_segment_lookup(sharpceainrec, "bitmap");
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367 mbobra 1.1 DRMS_Array_t *bitmaskArray = drms_segment_read(bitmaskSeg, DRMS_TYPE_INT, &status);
368 int *bitmask = (int *) bitmaskArray->data; // get the previously made mask array
369
370 //Use conf_disambig map as a threshold on spaceweather quantities
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371 mbobra 1.6 DRMS_Segment_t *maskSeg = drms_segment_lookup(sharpceainrec, "conf_disambig");
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372 mbobra 1.1 DRMS_Array_t *maskArray = drms_segment_read(maskSeg, DRMS_TYPE_INT, &status);
373 if (status != DRMS_SUCCESS)
374 DIE("No CONF_DISAMBIG segment.");
375 int *mask = (int *) maskArray->data; // get the previously made mask array
376
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377 mbobra 1.6 //Use magnetogram map to compute R
378 DRMS_Segment_t *losSeg = drms_segment_lookup(sharpceainrec, "magnetogram");
379 DRMS_Array_t *losArray = drms_segment_read(losSeg, DRMS_TYPE_FLOAT, &status);
380 float *los = (float *) losArray->data; // los
381
382 DRMS_Segment_t *bxSeg = drms_segment_lookup(sharpceainrec, "Bp");
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383 mbobra 1.1 DRMS_Array_t *bxArray = drms_segment_read(bxSeg, DRMS_TYPE_FLOAT, &status);
384 float *bx = (float *) bxArray->data; // bx
385
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386 mbobra 1.6 DRMS_Segment_t *bySeg = drms_segment_lookup(sharpceainrec, "Bt");
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387 mbobra 1.1 DRMS_Array_t *byArray = drms_segment_read(bySeg, DRMS_TYPE_FLOAT, &status);
388 float *by = (float *) byArray->data; // by
389 for (int i = 0; i < nxny; i++) by[i] *= -1;
390
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391 mbobra 1.6 DRMS_Segment_t *bzSeg = drms_segment_lookup(sharpceainrec, "Br");
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392 mbobra 1.1 DRMS_Array_t *bzArray = drms_segment_read(bzSeg, DRMS_TYPE_FLOAT, &status);
393 float *bz = (float *) bzArray->data; // bz
394
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395 mbobra 1.6 DRMS_Segment_t *bz_errSeg = drms_segment_lookup(sharpceainrec, "Br_err");
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396 mbobra 1.1 DRMS_Array_t *bz_errArray = drms_segment_read(bz_errSeg, DRMS_TYPE_FLOAT, &status);
397 float *bz_err = (float *) bz_errArray->data; // bz_err
398
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399 mbobra 1.6 DRMS_Segment_t *by_errSeg = drms_segment_lookup(sharpceainrec, "Bt_err");
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400 mbobra 1.1 DRMS_Array_t *by_errArray = drms_segment_read(by_errSeg, DRMS_TYPE_FLOAT, &status);
401 float *by_err = (float *) by_errArray->data; // by_err
402
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403 mbobra 1.6 DRMS_Segment_t *bx_errSeg = drms_segment_lookup(sharpceainrec, "Bp_err");
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404 mbobra 1.1 DRMS_Array_t *bx_errArray = drms_segment_read(bx_errSeg, DRMS_TYPE_FLOAT, &status);
405 float *bx_err = (float *) bx_errArray->data; // bx_err
406
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407 mbobra 1.6 /***** USFLUX, Example Function 1 *************************************/
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408 mbobra 1.1 if (meanvfflag)
409 {
410 // Compute unsigned flux
411 if (computeAbsFlux(bz_err, bz , dims, &absFlux, &mean_vf, &mean_vf_err,
412 &count_mask, mask, bitmask, cdelt1, rsun_ref, rsun_obs))
413 {
414 mean_vf = DRMS_MISSING_FLOAT;
415 mean_vf_err = DRMS_MISSING_FLOAT;
416 count_mask = DRMS_MISSING_INT;
417 }
418
419 drms_setkey_float(sharpoutrec, "USFLUX", mean_vf);
420 drms_setkey_float(sharpoutrec, "CMASK", count_mask);
421 drms_setkey_float(sharpoutrec, "ERRVF", mean_vf_err);
422
423 drms_setkey_float(sharpceaoutrec, "USFLUX", mean_vf);
424 drms_setkey_float(sharpceaoutrec, "CMASK", count_mask);
425 drms_setkey_float(sharpceaoutrec, "ERRVF", mean_vf_err);
426 }
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427 mbobra 1.6
428 /***** RPARAM, Example Function 14 *************************************/
429 if (r_valueflag)
430 {
431 if (computeR(bz_err, los , dims, &Rparam, cdelt1, rim, p1p0, p1n0,
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432 mbobra 1.7 p1p, p1n, p1, pmap, nx1, ny1, scale, p1pad, nxp, nyp, pmapn))
433
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434 mbobra 1.6 {
435 Rparam = DRMS_MISSING_FLOAT;
436 }
437
438 drms_setkey_float(sharpoutrec, "R_VALUE", Rparam);
439 drms_setkey_float(sharpceaoutrec, "R_VALUE", Rparam);
440
441 }
442
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443 mbobra 1.1 /***** MEANPOT and TOTPOT, Example Function 13 (Requires Keiji's code) **/
444
445 if (totpotflag || meanpotflag)
446 {
447 // First compute potential field
448 for (int i = 0; i < nxny; i++) bpz[i] = bz[i];
449 greenpot(bpx, bpy, bpz, nx, ny);
450
451 // Then compute energy
452 if (computeFreeEnergy(bx_err, by_err, bx, by, bpx, bpy, dims,
453 &meanpot, &meanpot_err, &totpot, &totpot_err,
454 mask, bitmask, cdelt1, rsun_ref, rsun_obs))
455 {
456 meanpot = DRMS_MISSING_FLOAT;
457 totpot = DRMS_MISSING_FLOAT;
458 meanpot_err = DRMS_MISSING_FLOAT;
459 totpot_err = DRMS_MISSING_FLOAT;
460 }
461
462 // Set sharp keys
463 drms_setkey_float(sharpoutrec, "MEANPOT", meanpot);
464 mbobra 1.1 drms_setkey_float(sharpoutrec, "TOTPOT", totpot);
465 drms_setkey_float(sharpoutrec, "ERRMPOT", meanpot_err);
466 drms_setkey_float(sharpoutrec, "ERRTPOT", totpot_err);
467
468 // Set sharp cea keys
469 drms_setkey_float(sharpceaoutrec, "MEANPOT", meanpot);
470 drms_setkey_float(sharpceaoutrec, "TOTPOT", totpot);
471 drms_setkey_float(sharpceaoutrec, "ERRMPOT", meanpot_err);
472 drms_setkey_float(sharpceaoutrec, "ERRTPOT", totpot_err);
473 }
474
475 /***** MEANGAM, Example Function 3 ************************************/
476
477 if (meangamflag)
478 {
479 // First compute horizontal field
480 computeBh(bx_err, by_err, bh_err, bx, by, bz, bh, dims, &mean_hf, mask, bitmask);
481
482 // Then compute inclination angle, gamma
483 if (computeGamma(bz_err, bh_err, bx, by, bz, bh, dims, &mean_gamma, &mean_gamma_err,mask, bitmask))
484 {
485 mbobra 1.1 mean_gamma = DRMS_MISSING_FLOAT;
486 mean_gamma_err = DRMS_MISSING_FLOAT;
487 }
488
489 // Set sharp keys
490 drms_setkey_float(sharpoutrec, "MEANGAM", mean_gamma);
491 drms_setkey_float(sharpoutrec, "ERRGAM", mean_gamma_err);
492
493 // Set sharp cea keys
494 drms_setkey_float(sharpceaoutrec, "MEANGAM", mean_gamma);
495 drms_setkey_float(sharpceaoutrec, "ERRGAM", mean_gamma_err);
496 }
497
498 /***** MEANGBT, Example Function 5 (Requires Function 4) *************/
499
500 if (meangbtflag)
501 {
502 // First, compute Bt
503 computeB_total(bx_err, by_err, bz_err, bt_err, bx, by, bz, bt, dims, mask, bitmask);
504
505 // Then take the derivative of Bt
506 mbobra 1.1 if (computeBtotalderivative(bt, dims, &mean_derivative_btotal, mask, bitmask, derx_bt, dery_bt, bt_err,
507 &mean_derivative_btotal_err))
508 {
509 mean_derivative_btotal = DRMS_MISSING_FLOAT;
510 mean_derivative_btotal_err = DRMS_MISSING_FLOAT;
511 }
512
513 // Set sharp keys
514 drms_setkey_float(sharpoutrec, "MEANGBT", mean_derivative_btotal);
515 drms_setkey_float(sharpoutrec, "ERRBT", mean_derivative_btotal_err);
516
517 // Set sharp cea keys
518 drms_setkey_float(sharpceaoutrec, "MEANGBT", mean_derivative_btotal);
519 drms_setkey_float(sharpceaoutrec, "ERRBT", mean_derivative_btotal_err);
520 }
521
522 /***** MEANGBH, Example Function 6 (Requires Function 2) *************/
523
524 if (meangbhflag)
525 {
526 // First, compute Bh
527 mbobra 1.1 computeBh(bx_err, by_err, bh_err, bx, by, bz, bh, dims, &mean_hf, mask, bitmask);
528
529 // Then take the derivative of Bh
530 if (computeBhderivative(bh, bh_err, dims, &mean_derivative_bh, &mean_derivative_bh_err, mask, bitmask, derx_bh, dery_bh))
531 {
532 mean_derivative_bh = DRMS_MISSING_FLOAT;
533 mean_derivative_bh_err = DRMS_MISSING_FLOAT;
534 }
535
536 // Set sharp keys
537 drms_setkey_float(sharpoutrec, "MEANGBH", mean_derivative_bh);
538 drms_setkey_float(sharpoutrec, "ERRBH", mean_derivative_bh_err);
539
540 // Set sharp cea keys
541 drms_setkey_float(sharpceaoutrec, "MEANGBH", mean_derivative_bh);
542 drms_setkey_float(sharpceaoutrec, "ERRBH", mean_derivative_bh_err);
543 }
544
545 /***** MEANGBZ, Example Function 7 ************************************/
546
547 if (meangbzflag)
548 mbobra 1.1 {
549 // Compute Bz derivative
550 if (computeBzderivative(bz, bz_err, dims, &mean_derivative_bz, &mean_derivative_bz_err, mask, bitmask, derx_bz, dery_bz))
551 {
552 mean_derivative_bz = DRMS_MISSING_FLOAT;
553 mean_derivative_bz_err = DRMS_MISSING_FLOAT;
554 }
555
556 // Set sharp keys
557 drms_setkey_float(sharpoutrec, "MEANGBZ", mean_derivative_bz);
558 drms_setkey_float(sharpoutrec, "ERRBZ", mean_derivative_bz_err);
559
560 // Set sharp cea keys
561 drms_setkey_float(sharpceaoutrec, "MEANGBZ", mean_derivative_bz);
562 drms_setkey_float(sharpceaoutrec, "ERRBZ", mean_derivative_bz_err);
563 }
564
565 /***** MEANJZD and TOTUSJZ, Example Function 9 (Requires Function 8) ***/
566
567 if (meanjzdflag || totusjzflag)
568 {
569 mbobra 1.1 // First, compute Jz on all pixels
570 computeJz(bx_err, by_err, bx, by, dims, jz, jz_err, jz_err_squared, mask, bitmask, cdelt1, rsun_ref, rsun_obs,
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571 mbobra 1.11 derx, dery, err_term1, err_term2);
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572 mbobra 1.1
573 // Then take the sums of the appropriate pixels
574 if(computeJzsmooth(bx, by, dims, jz, jz_smooth, jz_err, jz_rms_err, jz_err_squared_smooth, &mean_jz,
575 &mean_jz_err, &us_i, &us_i_err, mask, bitmask, cdelt1,
576 rsun_ref, rsun_obs, derx, dery))
577
578
579 {
580 mean_jz = DRMS_MISSING_FLOAT;
581 us_i = DRMS_MISSING_FLOAT;
582 mean_jz_err = DRMS_MISSING_FLOAT;
583 us_i_err = DRMS_MISSING_FLOAT;
584 }
585
586 // Set sharp keys
587 drms_setkey_float(sharpoutrec, "MEANJZD", mean_jz);
588 drms_setkey_float(sharpoutrec, "TOTUSJZ", us_i);
589 drms_setkey_float(sharpoutrec, "ERRJZ", mean_jz_err);
590 drms_setkey_float(sharpoutrec, "ERRUSI", us_i_err);
591
592 // Set sharp cea keys
593 mbobra 1.1 drms_setkey_float(sharpceaoutrec, "MEANJZD", mean_jz);
594 drms_setkey_float(sharpceaoutrec, "TOTUSJZ", us_i);
595 drms_setkey_float(sharpceaoutrec, "ERRJZ", mean_jz_err);
596 drms_setkey_float(sharpceaoutrec, "ERRUSI", us_i_err);
597 }
598
599 /***** MEANALP, Example Function 10 (Requires Function 8)*********/
600
601 if (meanalpflag)
602 {
603 // First, compute Jz on all pixels
604 computeJz(bx_err, by_err, bx, by, dims, jz, jz_err, jz_err_squared, mask, bitmask, cdelt1, rsun_ref, rsun_obs,
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605 mbobra 1.11 derx, dery, err_term1, err_term2);
|
606 mbobra 1.1
607 // Then compute alpha quantities on select pixels
608 if (computeAlpha(jz_err, bz_err, bz, dims, jz, jz_smooth, &mean_alpha, &mean_alpha_err,
609 mask, bitmask, cdelt1, rsun_ref, rsun_obs))
610 {
611 mean_alpha = DRMS_MISSING_FLOAT;
612 mean_alpha_err = DRMS_MISSING_FLOAT;
613 }
614
615 // Set sharp keys
616 drms_setkey_float(sharpoutrec, "MEANALP", mean_alpha);
617 drms_setkey_float(sharpoutrec, "ERRALP", mean_alpha_err);
618
619 // Set sharp cea keys
620 drms_setkey_float(sharpceaoutrec, "MEANALP", mean_alpha);
621 drms_setkey_float(sharpceaoutrec, "ERRALP", mean_alpha_err);
622
623 }
624
625 /***** MEANJZH, TOTUSJH, ABSNJZH, Example Function 11 (Requires Function 8) ***/
626
627 mbobra 1.1 if (meanjzhflag || totusjhflag || absnjzhflag)
628 {
629 // First, compute Jz on all pixels
630 computeJz(bx_err, by_err, bx, by, dims, jz, jz_err, jz_err_squared, mask, bitmask, cdelt1, rsun_ref, rsun_obs,
|
631 mbobra 1.11 derx, dery, err_term1, err_term2);
|
632 mbobra 1.1
633 // Then compute helicity quantities on select pixels
634 if (computeHelicity(jz_err, jz_rms_err, bz_err, bz, dims, jz, &mean_ih, &mean_ih_err, &total_us_ih,
635 &total_abs_ih, &total_us_ih_err, &total_abs_ih_err, mask, bitmask, cdelt1, rsun_ref, rsun_obs))
636 {
637 mean_ih = DRMS_MISSING_FLOAT;
638 total_us_ih = DRMS_MISSING_FLOAT;
639 total_abs_ih = DRMS_MISSING_FLOAT;
640 mean_ih_err = DRMS_MISSING_FLOAT;
641 total_us_ih_err = DRMS_MISSING_FLOAT;
642 total_abs_ih_err = DRMS_MISSING_FLOAT;
643 }
644
645 // Set sharp keys
646 drms_setkey_float(sharpoutrec, "MEANJZH", mean_ih);
647 drms_setkey_float(sharpoutrec, "TOTUSJH", total_us_ih);
648 drms_setkey_float(sharpoutrec, "ABSNJZH", total_abs_ih);
649 drms_setkey_float(sharpoutrec, "ERRMIH", mean_ih_err);
650 drms_setkey_float(sharpoutrec, "ERRTUI", total_us_ih_err);
651 drms_setkey_float(sharpoutrec, "ERRTAI", total_abs_ih_err);
652
653 mbobra 1.1 // Set sharp cea keys
654 drms_setkey_float(sharpceaoutrec, "MEANJZH", mean_ih);
655 drms_setkey_float(sharpceaoutrec, "TOTUSJH", total_us_ih);
656 drms_setkey_float(sharpceaoutrec, "ABSNJZH", total_abs_ih);
657 drms_setkey_float(sharpceaoutrec, "ERRMIH", mean_ih_err);
658 drms_setkey_float(sharpceaoutrec, "ERRTUI", total_us_ih_err);
659 drms_setkey_float(sharpceaoutrec, "ERRTAI", total_abs_ih_err);
660 }
661
662 /***** SAVNCPP, Example Function 12 (Requires Function 8) *******************/
663
664 if (savncppflag)
665 {
666 // First, compute Jz on all pixels
667 computeJz(bx_err, by_err, bx, by, dims, jz, jz_err, jz_err_squared, mask, bitmask, cdelt1, rsun_ref, rsun_obs,
|
668 mbobra 1.11 derx, dery, err_term1, err_term2);
|
669 mbobra 1.1
670 // Then compute sums of Jz on select pixels
671 if (computeSumAbsPerPolarity(jz_err, bz_err, bz, jz, dims, &totaljz, &totaljz_err,
672 mask, bitmask, cdelt1, rsun_ref, rsun_obs))
673 {
674 totaljz = DRMS_MISSING_FLOAT;
675 totaljz_err = DRMS_MISSING_FLOAT;
676 }
677
678 // Set sharp keys
679 drms_setkey_float(sharpoutrec, "SAVNCPP", totaljz);
680 drms_setkey_float(sharpoutrec, "ERRJHT", totaljz_err);
681
682 // Set sharp cea keys
683 drms_setkey_float(sharpceaoutrec, "SAVNCPP", totaljz);
684 drms_setkey_float(sharpceaoutrec, "ERRJHT", totaljz_err);
685 }
686
687 /***** MEANSHR and SHRGT45, Example Function 14 (Requires Keiji's code) **********/
688
689 if (meanshrflag || shrgt45flag)
690 mbobra 1.1 {
691 // First compute potential field
692 for (int i = 0; i < nxny; i++) bpz[i] = bz[i];
693 greenpot(bpx, bpy, bpz, nx, ny);
694
695 // Then compute shear angles
696 if (computeShearAngle(bx_err, by_err, bh_err, bx, by, bz, bpx, bpy, bpz, dims,
697 &meanshear_angle, &meanshear_angle_err, &area_w_shear_gt_45,
698 mask, bitmask))
699 {
700 meanshear_angle = DRMS_MISSING_FLOAT; // If fail, fill in NaN
701 area_w_shear_gt_45 = DRMS_MISSING_FLOAT;
702 meanshear_angle_err= DRMS_MISSING_FLOAT;
703 }
704
705 // Set sharp keys
706 drms_setkey_float(sharpoutrec, "MEANSHR", meanshear_angle);
707 drms_setkey_float(sharpoutrec, "SHRGT45", area_w_shear_gt_45);
708 drms_setkey_float(sharpoutrec, "ERRMSHA", meanshear_angle_err);
709
710 // Set sharp cea keys
711 mbobra 1.1 drms_setkey_float(sharpceaoutrec, "MEANSHR", meanshear_angle);
712 drms_setkey_float(sharpceaoutrec, "SHRGT45", area_w_shear_gt_45);
713 drms_setkey_float(sharpceaoutrec, "ERRMSHA", meanshear_angle_err);
714 }
715
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716 mbobra 1.8 /***** TOTFX, TOTFY, TOTFX, TOTBSQ, EPSX, EPSY, EPSZ , Example Function 16 (Lorentz forces) **********/
717
718 if (totfxflag || totfyflag || totfzflag || totbsqflag || epsxflag || epsyflag || epszflag)
719 {
720
721 // Compute Lorentz forces
722 if (computeLorentz(bx, by, bz, fx, fy, fz, dims, &totfx, &totfy, &totfz, &totbsq,
723 &epsx, &epsy, &epsz, mask, bitmask, cdelt1, rsun_ref, rsun_obs))
724 {
725 totfx = DRMS_MISSING_FLOAT;
726 totfy = DRMS_MISSING_FLOAT;
727 totfz = DRMS_MISSING_FLOAT;
728 totbsq = DRMS_MISSING_FLOAT;
729 epsx = DRMS_MISSING_FLOAT;
730 epsy = DRMS_MISSING_FLOAT;
731 epsz = DRMS_MISSING_FLOAT;
732 }
733
734 // Set sharp keys
735 drms_setkey_float(sharpoutrec, "TOTFX", totfx);
736 drms_setkey_float(sharpoutrec, "TOTFY", totfy);
737 mbobra 1.8 drms_setkey_float(sharpoutrec, "TOTFZ", totfz);
738 drms_setkey_float(sharpoutrec, "TOTBSQ",totbsq);
739 drms_setkey_float(sharpoutrec, "EPSX", epsx);
740 drms_setkey_float(sharpoutrec, "EPSY", epsy);
741 drms_setkey_float(sharpoutrec, "EPSZ", epsz);
742
743 // Set sharp cea keys
744 drms_setkey_float(sharpceaoutrec, "TOTFX", totfx);
745 drms_setkey_float(sharpceaoutrec, "TOTFY", totfy);
746 drms_setkey_float(sharpceaoutrec, "TOTFZ", totfz);
747 drms_setkey_float(sharpceaoutrec, "TOTBSQ",totbsq);
748 drms_setkey_float(sharpceaoutrec, "EPSX", epsx);
749 drms_setkey_float(sharpceaoutrec, "EPSY", epsy);
750 drms_setkey_float(sharpceaoutrec, "EPSZ", epsz);
751
752 }
753
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754 mbobra 1.1 /******************************* END FLAGS **********************************/
755
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756 mbobra 1.10
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757 mbobra 1.1 drms_free_array(bitmaskArray);
758 drms_free_array(maskArray);
759 drms_free_array(bxArray);
760 drms_free_array(byArray);
761 drms_free_array(bzArray);
762 drms_free_array(bx_errArray);
763 drms_free_array(by_errArray);
764 drms_free_array(bz_errArray);
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765 mbobra 1.6 drms_free_array(losArray);
|
766 mbobra 1.10
|
767 mbobra 1.11 // free the arrays that are related to the lorentz calculation
768 free(fx); free(fy); free(fz);
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769 mbobra 1.1 //used for select calculations
770 free(bh); free(bt); free(jz);
771 free(bpx); free(bpy); free(bpz);
772 free(derx); free(dery);
773 free(derx_bt); free(dery_bt);
774 free(derx_bz); free(dery_bz);
775 free(derx_bh); free(dery_bh);
776 free(bt_err); free(bh_err); free(jz_err);
777 free(jz_err_squared); free(jz_rms_err);
778 free(cvsinfoall);
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779 mbobra 1.7
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780 mbobra 1.6 free(rim);
781 free(p1p0);
782 free(p1n0);
783 free(p1p);
784 free(p1n);
785 free(p1);
786 free(pmap);
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787 mbobra 1.7 free(p1pad);
788 free(pmapn);
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789 mbobra 1.11 free(err_term2);
790 free(err_term1);
791
792
793 } //endfor
794
795 drms_close_records(sharpinrecset, DRMS_FREE_RECORD);
796 drms_close_records(sharpceainrecset, DRMS_FREE_RECORD);
797
798 drms_close_records(sharpoutrecset, DRMS_INSERT_RECORD);
799 drms_close_records(sharpceaoutrecset, DRMS_INSERT_RECORD);
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800 mbobra 1.6
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801 mbobra 1.9 printf("Success=%d\n",sameflag);
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802 arta 1.3 return 0;
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803 mbobra 1.1 } // DoIt
|
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